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elastix::CUDAResampler< TElastix > Class Template Reference

#include <elxCUDAResampler.h>

Inheritance diagram for elastix::CUDAResampler< TElastix >:
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Collaboration diagram for elastix::CUDAResampler< TElastix >:
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Public Types

typedef
Superclass2::ConfigurationPointer 
ConfigurationPointer
typedef
Superclass2::ConfigurationType 
ConfigurationType
typedef SmartPointer< const SelfConstPointer
typedef Superclass2::ElastixPointer ElastixPointer
typedef Superclass2::ElastixType ElastixType
typedef Superclass1::IndexType IndexType
typedef
Superclass1::InputImagePointer 
InputImagePointer
typedef
Superclass1::InputImageRegionType 
InputImageRegionType
typedef Superclass1::InputImageType InputImageType
typedef
Superclass1::InterpolatorPointerType 
InterpolatePointerType
typedef
Superclass1::InterpolatorType 
InterpolatorType
typedef Superclass2::ITKBaseType ITKBaseType
typedef
Superclass1::OriginPointType 
OriginPointType
typedef
Superclass1::OutputImagePointer 
OutputImagePointer
typedef
Superclass1::OutputImageRegionType 
OutputImageRegionType
typedef
Superclass1::OutputImageType 
OutputImageType
typedef Superclass1::PixelType PixelType
typedef SmartPointer< SelfPointer
typedef Superclass1::PointType PointType
typedef
Superclass2::RegistrationPointer 
RegistrationPointer
typedef
Superclass2::RegistrationType 
RegistrationType
typedef CUDAResampler Self
typedef Superclass1::SizeType SizeType
typedef Superclass1::SpacingType SpacingType
typedef
itkCUDAResampleImageFilter
< typename ResamplerBase
< TElastix >::InputImageType,
typename ResamplerBase
< TElastix >::OutputImageType,
typename ResamplerBase
< TElastix >::CoordRepType
Superclass1
typedef ResamplerBase< TElastix > Superclass2
typedef
Superclass1::TransformPointerType 
TransformPointerType
typedef Superclass1::TransformType TransformType
typedef
Superclass1::ValidTransformPointer 
ValidTransformPointer
- Public Types inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
typedef SmartPointer< const SelfConstPointer
typedef
cuda::CUDAResampleImageFilter
< typename
InternalBSplineTransformType::ParametersValueType,
typename ResamplerBase
< TElastix >
::InputImageType::PixelType,
float
CudaResampleImageFilterType
typedef Superclass::DirectionType DirectionType
typedef Superclass::ImageBaseType ImageBaseType
typedef Superclass::IndexType IndexType
typedef
Superclass::InputImageConstPointer 
InputImageConstPointer
typedef
Superclass::InputImagePointer 
InputImagePointer
typedef
Superclass::InputImageRegionType 
InputImageRegionType
typedef Superclass::InputImageType InputImageType
typedef Superclass::InputPixelType InputPixelType
typedef
AdvancedBSplineDeformableTransform
< ResamplerBase< TElastix >
::CoordRepType, 3, 3 > 
InternalAdvancedBSplineTransformType
typedef
BSplineDeformableTransform
< ResamplerBase< TElastix >
::CoordRepType, 3, 3 > 
InternalBSplineTransformType
typedef
AdvancedCombinationTransform
< ResamplerBase< TElastix >
::CoordRepType, 3 > 
InternalComboTransformType
typedef
Superclass::InterpolatorPointerType 
InterpolatorPointerType
typedef
Superclass::InterpolatorType 
InterpolatorType
typedef Superclass::OriginPointType OriginPointType
typedef
Superclass::OutputImagePointer 
OutputImagePointer
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
typedef Superclass::OutputImageType OutputImageType
typedef Superclass::PixelType PixelType
typedef SmartPointer< SelfPointer
typedef Superclass::PointType PointType
typedef itkCUDAResampleImageFilter Self
typedef Superclass::SizeType SizeType
typedef Superclass::SpacingType SpacingType
typedef ResampleImageFilter
< ResamplerBase< TElastix >
::InputImageType,
ResamplerBase< TElastix >
::OutputImageType,
ResamplerBase< TElastix >
::CoordRepType > 
Superclass
typedef
Superclass::TransformPointerType 
TransformPointerType
typedef Superclass::TransformType TransformType
typedef
InternalAdvancedBSplineTransformType::ConstPointer 
ValidTransformConstPointer
typedef
InternalAdvancedBSplineTransformType::Pointer 
ValidTransformPointer
- Public Types inherited from elastix::ResamplerBase< TElastix >
typedef
Superclass::ConfigurationPointer 
ConfigurationPointer
typedef
Superclass::ConfigurationType 
ConfigurationType
typedef ElastixType::CoordRepType CoordRepType
typedef ITKBaseType::DirectionType DirectionType
typedef Superclass::ElastixPointer ElastixPointer
typedef Superclass::ElastixType ElastixType
typedef ITKBaseType::IndexType IndexType
typedef
ElastixType::MovingImageType 
InputImageType
typedef
ITKBaseType::InterpolatorType 
InterpolatorType
typedef ResampleImageFilter
< InputImageType,
OutputImageType, CoordRepType
ITKBaseType
typedef
ITKBaseType::OriginPointType 
OriginPointType
typedef
ElastixType::MovingImageType 
OutputImageType
typedef ITKBaseType::PixelType OutputPixelType
typedef elx::ProgressCommand ProgressCommandType
typedef
Superclass::RegistrationPointer 
RegistrationPointer
typedef
Superclass::RegistrationType 
RegistrationType
typedef ResamplerBase Self
typedef ITKBaseType::SizeType SizeType
typedef ITKBaseType::SpacingType SpacingType
typedef BaseComponentSE< TElastix > Superclass
typedef ITKBaseType::TransformType TransformType
- Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef
ElastixType::ConfigurationPointer 
ConfigurationPointer
typedef
ElastixType::ConfigurationType 
ConfigurationType
typedef ElastixType::Pointer ElastixPointer
typedef TElastix ElastixType
typedef RegistrationTypeRegistrationPointer
typedef
ElastixType::RegistrationBaseType 
RegistrationType
typedef BaseComponentSE Self
typedef BaseComponent Superclass

Public Member Functions

virtual int BeforeAll (void)
virtual void BeforeRegistration (void)
 elxClassNameMacro ("CUDAResampler")
virtual const char * GetClassName () const
virtual void ReadFromFile (void)
virtual void WriteToFile (void) const
- Public Member Functions inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
virtual void GenerateData (void)
virtual bool GetUseCuda () const
virtual bool GetUseFastCUDAKernel () const
virtual bool GetUseGPUToCastData () const
virtual const WarningReportType & GetWarningReport (void) const
virtual void SetUseCuda (bool _arg)
virtual void SetUseFastCUDAKernel (bool _arg)
virtual void SetUseGPUToCastData (bool _arg)
virtual void UseCudaOff ()
virtual void UseCudaOn ()
virtual void UseFastCUDAKernelOff ()
virtual void UseFastCUDAKernelOn ()
virtual void UseGPUToCastDataOff ()
virtual void UseGPUToCastDataOn ()
- Public Member Functions inherited from elastix::ResamplerBase< TElastix >
virtual void AfterEachResolutionBase (void)
virtual void AfterRegistrationBase (void)
virtual int BeforeAllTransformix (void)
virtual void BeforeRegistrationBase (void)
virtual ITKBaseTypeGetAsITKBaseType (void)
virtual const ITKBaseTypeGetAsITKBaseType (void) const
 itkStaticConstMacro (ImageDimension, unsigned int, OutputImageType::ImageDimension)
virtual void WriteResultImage (const char *filename)
- Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationTypeGetConfiguration (void) const
virtual ElastixTypeGetElastix (void) const
virtual RegistrationPointer GetRegistration (void) const
virtual void SetConfiguration (ConfigurationType *_arg)
virtual void SetElastix (ElastixType *_arg)
- Public Member Functions inherited from elastix::BaseComponent
virtual void AfterEachIteration (void)
virtual void AfterEachIterationBase (void)
virtual void AfterEachResolution (void)
virtual void AfterRegistration (void)
virtual int BeforeAllBase (void)
virtual void BeforeEachResolution (void)
virtual void BeforeEachResolutionBase (void)
virtual const char * elxGetClassName (void) const
virtual const char * GetComponentLabel (void) const
virtual void SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions

static Pointer New ()

Protected Member Functions

virtual void CheckForValidConfiguration (ValidTransformPointer &bSplineTransform)
 CUDAResampler ()
virtual ~CUDAResampler ()
- Protected Member Functions inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
 itkCUDAResampleImageFilter ()
 ~itkCUDAResampleImageFilter ()
- Protected Member Functions inherited from elastix::ResamplerBase< TElastix >
 ResamplerBase ()
virtual void SetComponents (void)
virtual ~ResamplerBase ()
- Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
 BaseComponentSE ()
virtual ~BaseComponentSE ()
- Protected Member Functions inherited from elastix::BaseComponent
 BaseComponent ()
virtual ~BaseComponent ()

Private Member Functions

 CUDAResampler (const Self &)
void operator= (const Self &)

Additional Inherited Members

- Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer m_Configuration
ElastixPointer m_Elastix
RegistrationPointer m_Registration

Detailed Description

template<class TElastix>
class elastix::CUDAResampler< TElastix >

A resampler based on the itk::CUDAResampleImageFilter.

Warning
The implementation is currently very limited: only a single third order B-spline transform is supported for 3D images together with third order B-spline interpolation.

The parameters used in this class are:

Parameters:
Resampler: Select this resampler as follows:
(Resampler "CUDAResampler")

Definition at line 41 of file elxCUDAResampler.h.

Member Typedef Documentation

template<class TElastix >
typedef Superclass2::ConfigurationPointer elastix::CUDAResampler< TElastix >::ConfigurationPointer

Definition at line 95 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::ConfigurationType elastix::CUDAResampler< TElastix >::ConfigurationType

Definition at line 94 of file elxCUDAResampler.h.

template<class TElastix >
typedef SmartPointer<const Self> elastix::CUDAResampler< TElastix >::ConstPointer

Definition at line 58 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::ElastixPointer elastix::CUDAResampler< TElastix >::ElastixPointer

Definition at line 93 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::ElastixType elastix::CUDAResampler< TElastix >::ElastixType

Typedef's from the ResamplerBase.

Definition at line 92 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::IndexType elastix::CUDAResampler< TElastix >::IndexType

Definition at line 83 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::InputImagePointer elastix::CUDAResampler< TElastix >::InputImagePointer

Definition at line 75 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::InputImageRegionType elastix::CUDAResampler< TElastix >::InputImageRegionType

Definition at line 77 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::InputImageType elastix::CUDAResampler< TElastix >::InputImageType

Typedef's inherited from the superclass.

Definition at line 73 of file elxCUDAResampler.h.

Definition at line 81 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::InterpolatorType elastix::CUDAResampler< TElastix >::InterpolatorType

Definition at line 80 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::ITKBaseType elastix::CUDAResampler< TElastix >::ITKBaseType

Definition at line 98 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::OriginPointType elastix::CUDAResampler< TElastix >::OriginPointType

Definition at line 88 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::OutputImagePointer elastix::CUDAResampler< TElastix >::OutputImagePointer

Definition at line 76 of file elxCUDAResampler.h.

Definition at line 86 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::OutputImageType elastix::CUDAResampler< TElastix >::OutputImageType

Definition at line 74 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::PixelType elastix::CUDAResampler< TElastix >::PixelType

Definition at line 85 of file elxCUDAResampler.h.

template<class TElastix >
typedef SmartPointer<Self> elastix::CUDAResampler< TElastix >::Pointer

Definition at line 57 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::PointType elastix::CUDAResampler< TElastix >::PointType

Definition at line 84 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::RegistrationPointer elastix::CUDAResampler< TElastix >::RegistrationPointer

Definition at line 97 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass2::RegistrationType elastix::CUDAResampler< TElastix >::RegistrationType

Definition at line 96 of file elxCUDAResampler.h.

template<class TElastix >
typedef CUDAResampler elastix::CUDAResampler< TElastix >::Self

Standard ITK-stuff.

Definition at line 51 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::SizeType elastix::CUDAResampler< TElastix >::SizeType

Definition at line 82 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::SpacingType elastix::CUDAResampler< TElastix >::SpacingType

Definition at line 87 of file elxCUDAResampler.h.

template<class TElastix >
typedef itkCUDAResampleImageFilter< typename ResamplerBase<TElastix>::InputImageType, typename ResamplerBase<TElastix>::OutputImageType, typename ResamplerBase<TElastix>::CoordRepType > elastix::CUDAResampler< TElastix >::Superclass1

Definition at line 55 of file elxCUDAResampler.h.

template<class TElastix >
typedef ResamplerBase<TElastix> elastix::CUDAResampler< TElastix >::Superclass2

Definition at line 56 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::TransformPointerType elastix::CUDAResampler< TElastix >::TransformPointerType

Definition at line 79 of file elxCUDAResampler.h.

template<class TElastix >
typedef Superclass1::TransformType elastix::CUDAResampler< TElastix >::TransformType

Definition at line 78 of file elxCUDAResampler.h.

Definition at line 89 of file elxCUDAResampler.h.

Constructor & Destructor Documentation

template<class TElastix >
elastix::CUDAResampler< TElastix >::CUDAResampler ( )
inlineprotected

The constructor.

Definition at line 113 of file elxCUDAResampler.h.

template<class TElastix >
virtual elastix::CUDAResampler< TElastix >::~CUDAResampler ( )
inlineprotectedvirtual

The destructor.

Definition at line 115 of file elxCUDAResampler.h.

template<class TElastix >
elastix::CUDAResampler< TElastix >::CUDAResampler ( const Self )
private

The private constructor.

Member Function Documentation

template<class TElastix >
virtual int elastix::CUDAResampler< TElastix >::BeforeAll ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::CUDAResampler< TElastix >::BeforeRegistration ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::CUDAResampler< TElastix >::CheckForValidConfiguration ( ValidTransformPointer bSplineTransform)
protectedvirtual

Overwrite from itkCUDAResampleImageFilter. We simply call the Superclass and print the warning messages to elxout.

Reimplemented from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >.

template<class TElastix >
elastix::CUDAResampler< TElastix >::elxClassNameMacro ( "CUDAResampler< TElastix >"  )

Name of this class. Use this name in the parameter file to select this specific resampler.
example: (Resampler "CUDAResampler")

template<class TElastix >
virtual const char* elastix::CUDAResampler< TElastix >::GetClassName ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from elastix::ResamplerBase< TElastix >.

template<class TElastix >
static Pointer elastix::CUDAResampler< TElastix >::New ( )
static
template<class TElastix >
void elastix::CUDAResampler< TElastix >::operator= ( const Self )
private

The private copy constructor.

template<class TElastix >
virtual void elastix::CUDAResampler< TElastix >::ReadFromFile ( void  )
virtual

Function to read parameters from a file.

Reimplemented from elastix::ResamplerBase< TElastix >.

template<class TElastix >
virtual void elastix::CUDAResampler< TElastix >::WriteToFile ( void  ) const
virtual

Function to write parameters to a file.

Reimplemented from elastix::ResamplerBase< TElastix >.



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